Search results for "Gene pool"

showing 10 items of 40 documents

Preserving Biodiversity in Marginal Rural Areas:Assessment of Morphological and Genetic Variabilityof a Sicilian Common Bean Germplasm Collection

2020

The historical cultivation of common bean (Phaseolus vulgaris L.) has resulted in the development of local populations/cultivars in restricted Italian rural areas. Many common bean landraces, still cultivated in small mountain areas from Sicily, have become outdated and endangered due to the commercial varieties spreading. These accessions are poorly known but often represent a genetic heritage to be preserved and enhanced. The ex situ conservation of fifty-seven Sicilian common bean landraces was carried out at the &ldquo

0106 biological sciences0301 basic medicineGermplasmseedbankBiodiversityPlant ScienceBiology01 natural sciencesArticleSettore BIO/01 - Botanica Generale03 medical and health sciencesSettore AGR/07 - Genetica Agrarialcsh:Botanymorphological descriptorsGenetic variabilityEcology Evolution Behavior and Systematicscommon beanGenetic diversityEcologyUPGMAgenetic diversityEx situ conservationlcsh:QK1-989030104 developmental biologyAgronomyAgricultural biodiversityGene pool010606 plant biology & botany
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Ecological and historical determinants of population genetic structure and diversity in the Mediterranean shrubRosmarinus officinalis(Lamiaceae)

2015

Population genetic studies of widespread Mediterranean shrubs are scarce compared with those of trees and narrow endemics or studies from phylogeographical perspectives, despite the key role these species may play in Mediterranean ecosystems. Knowledge on the effect of ecological factors in shaping their genetic patterns is also limited. In this study we investigate genetic diversity and population structure across 18 populations of Rosmarinus officinalis, a Mediterranean shrubland plant. Populations were sampled along two elevational gradients, one each on calcareous and siliceous soils in a mountain system in the eastern Iberian Peninsula, to decipher the effect of ecological factors on t…

0106 biological sciences0301 basic medicineMediterranean climateGenetic diversitygeographyeducation.field_of_studygeography.geographical_feature_categoryEcologyPopulationPlant ScienceBiology010603 evolutionary biology01 natural sciencesGene flowShrubland03 medical and health sciences030104 developmental biologyGenetic structureGene poolEndemismeducationEcology Evolution Behavior and SystematicsBotanical Journal of the Linnean Society
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Low but contrasting neutral genetic differentiation shaped by winter temperature in European great tits.

2016

Gene flow is usually thought to reduce genetic divergence and impede local adaptation by homogenising gene pools between populations. However, evidence for local adaptation and phenotypic differentiation in highly mobile species, experiencing high levels of gene flow, is emerging. Assessing population genetic structure at different spatial scales is thus a crucial step towards understanding mechanisms underlying intraspecific differentiation and diversification. Here, we studied the population genetic structure of a highly mobile species - the great tit Parus major - at different spatial scales. We analysed 884 individuals from 30 sites across Europe including 10 close-by sites (< 50 km), u…

0106 biological sciences0301 basic medicineSELECTIONZOOLOGIA[SDV]Life Sciences [q-bio]FLOWSOFTWARE01 natural sciencesmicrosatellitesBehavioral EcologyLOCAL ADAPTATIONParus majorComputingMilieux_MISCELLANEOUSeducation.field_of_studyLatitudeCLIMATE-CHANGEEcologyIsolation-by-distancelatitudePE&RCGedragsecologieWILD BIRD POPULATIONinternationalGenetic structureGene poolwinter severityPopulationAnimal Breeding and GenomicsBiologyPARUS-MAJOR010603 evolutionary biology03 medical and health sciencesPopulation genetic structureFokkerij en GenomicaMicrosatelliteseducationBiologyEcology Evolution Behavior and SystematicsLocal adaptationIsolation by distanceisolation-by-distance[SDV.GEN]Life Sciences [q-bio]/GeneticsGenetic diversityF-statisticsGenetic divergenceWinter severity030104 developmental biologyPARTIAL MIGRATIONF-statisticsNATAL DISPERSALRE-IMPLEMENTATIONWIAS570 Life sciences; biologyta1181Biological Journal of the Linnean Society
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Estimating the genetic diversity and structure ofQuercus trojanaWebb populations in Italy by SSRs: implications for management and conservation

2017

Studying the genetic diversity and structure of the current forest populations is essential for evaluating the ability to survive to future biotic and abiotic changes and planning conservation strategies. Quercus trojana is an eastern Mediterranean tree species with a fragmented distribution range, and its westernmost outposts are located in southern Italy. The demand for timber and cropland over the centuries has severely reduced it s occurrence in this part of the range. We assessed the genetic diversity and structure of the extant Italian populations of Q. trojana and derived conservation guidelines. A total of 322 samples were genotyped with six polymorphic nuclear microsatellite marker…

0106 biological sciences0301 basic medicineSettore AGR/05 - Assestamento Forestale E SelvicolturaQuercus trojana Genetic diversity Population structure SSRs markers ConservationQuercus trojanaRange (biology)PopulationConservationPopulation structure010603 evolutionary biology01 natural sciencesGenetic diversity03 medical and health sciencesQuercus trojanaeducationAbiotic componentQuercus trojana diversité génétique structure de populations marqueurs SSRs conservationGlobal and Planetary ChangeGenetic diversityeducation.field_of_studySSRs markersEcologybiologyEcologyForestrybiology.organism_classification030104 developmental biologyMicrosatelliteGene poolSpecies richnessCanadian Journal of Forest Research
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Monuments Unveiled: Genetic Characterization of Large Old Chestnut (Castanea sativa Mill.) Trees Using Comparative Nuclear and Chloroplast DNA Analys…

2020

Large old trees are extraordinary organisms. They not only represent a historical, landscape and environmental heritage of inestimable value, but they also witness a long history of environmental changes and human interventions, and constitute an as yet poorly known reserve of genetic variability which can be considered a great resource for management programs of forest species. This is the first genetic study on Italian, large, old chestnut trees (Castanea sativa Mill.). Ninety-nine trees were surveyed and analysed. For each tree, more than one sample from canopy and root suckers was collected to test for the genetic integrity of the individuals. All samples were genotyped using nine nucle…

0106 biological sciencesBiology010603 evolutionary biology01 natural sciencesCastanea sativa;03 medical and health sciencesBasal shootdomesticationnuclear microsatelliteGenetic variabilityDomestication<i>Castanea sativa</i>030304 developmental biology0303 health sciencesGenetic diversityCastanea sativaconservationForestrylcsh:QK900-989plastid DNAgenetic diversityPhylogeographyChloroplast DNAEvolutionary biologylcsh:Plant ecologyMicrosatelliteGene poolForests
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Wild

2021

Graphical abstract

0106 biological sciencesGermplasmPhytochemistryTPCC total phenolic contentElderberry flowerISSR inter-simple sequence repeatElderberry fruitIC50 the half maximal inhibitory concentrationBerrySambucus nigra01 natural sciencesArticleTFC total flavonoid contentDW dry weightSARS-CoV2 severe acute respiratory syndrome coronavirus 2Rutinchemistry.chemical_compoundBotanyELISA enzyme linked immunosorbent assayCultivarAntiviralComputingMethodologies_COMPUTERGRAPHICSGenetic diversityACE2 angiotensin converting enzyme 2biology010405 organic chemistryPVPP polyvinylpyrrolidoneSambucus nigra L.biology.organism_classification0104 chemical scienceschemistryHPLC high-performance liquid chromatographyTEAC trolox equivalent anti-radical capacityGene poolAgronomy and Crop Science010606 plant biology & botanyBinding domainIndustrial crops and products
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Transfer of individuals as a means of investigating natural selection in operation.

2009

Populations of Philaenus spumarius (Homoptera) displaying colour polymorphism at stable equilibrium were subjected to the introduction of alien phenotypes. In an exchange experiment between populations of isolated islands, 2/3 of population A, from Allgrundet, was transferred to Porskobben, and 2/3 of population P from Porskobben to Allgrundet. The immediate result of the transfer was A-type allele frequencies on Porskobben and P-type frequencies on Allgrundet. After four generations, the pre-transfer frequencies were almost completely restored. This change implies strong island-specific selection pressures. The process was remarkably rapid in view of the mixed composition of the gene pools…

0106 biological sciencesMaleHomopteraPopulationPhilaenus spumariusZoology010603 evolutionary biology01 natural sciencesHemiptera03 medical and health sciencesTransformation GeneticGene FrequencyGeneticsAnimalsSelection GeneticeducationAllele frequencySelection (genetic algorithm)Alleles030304 developmental biology0303 health scienceseducation.field_of_studyNatural selectionPolymorphism GeneticbiologyEcologyPopulation sizeGeneral Medicinebiology.organism_classificationPhenotypeGenesFemaleGene poolHereditas
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Gene flow and population admixture as the primary post-invasion processes in common ragweed (Ambrosia artemisiifolia) populations in France

2010

*An improved inference of the evolutionary history of invasive species may be achieved by analyzing the genetic variation and population differentiation of recently established populations and their ancestral (historical) populations. Employing this approach, we investigated the role of gene flow in the post-invasion evolution of common ragweed (Ambrosia artemisiifolia). *Using eight microsatellite loci, we compared genetic diversity and structure among nine pairs of historical and recent populations in France. Historical populations were reconstructed from herbarium specimens dated from the late 19th to early 20th century, whereas recent populations were collected within the last 5 yr. *Re…

0106 biological sciencesPhysiologyHISTORICAL POPULATIONSPopulation DynamicsPopulationPopulation geneticsPlant ScienceBiology010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesHERBARIUM SPECIMENGenetic variationGENE FLOWCluster AnalysiseducationPhylogenyAmbrosia artemisiifoliaPOPULATION HISTORIQUE030304 developmental biologyPrincipal Component Analysis0303 health scienceseducation.field_of_studyGenetic diversityGeographyEcologyGenetic Variation[ SDV.BV.PEP ] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBayes TheoremGene Pool15. Life on landbiology.organism_classificationINVASIVE SPECIESESPECES ENVAHISSANTES[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyAMBROSIA ARTEMISIIFOLIA(COMMON RAGWEED)Genetic distanceEvolutionary biologyPOPULATION ADMIXTUREFranceGene poolAmbrosiaPOST-INVASION PROCESS
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Genetic assessment of spatiotemporal evolutionary relationships and stocking effects in grayling (Thymallus thymallus, Salmonidae)

2002

Domestically reared introduced (or escaped) individuals can have detrimental genetic effects on the indigenous populations into which they are released. Consequently, numerous studies have attempted to estimate whether non-native specimens have contributed to the gene pool of wild populations. So far, the key limiting factor of such studies has been their lack of appropriate baseline genetic material. Here, microsatellite DNA analyses of historical scale samples and contemporary wild and introduced populations were used to assess spatiotemporal population structure and stocking effects among endangered Lake Saimaa (eastern Finland) grayling (Thymallus thymallus, Salmonidae). Significant dec…

0106 biological sciencesbiologyEcology010604 marine biology & hydrobiologyEndangered speciesIntrogressionGraylingbiology.organism_classification010603 evolutionary biology01 natural sciencesThymallusHatcheryStocking14. Life underwaterGene poolDomesticationEcology Evolution Behavior and SystematicsEcology Letters
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2018

The retrieval of ancient DNA from osteological material provides direct evidence of human genetic diversity in the past. Ancient DNA samples are often used to investigate whether there was population continuity in the settlement history of an area. Methods based on the serial coalescent algorithm have been developed to test whether the population continuity hypothesis can be statistically rejected by analysing DNA samples from the same region but of different ages. Rejection of this hypothesis is indicative of a large genetic shift, possibly due to immigration occurring between two sampling times. However, this approach is only able to reject a model of full continuity model (a total absenc…

0301 basic medicineBayes estimatoreducation.field_of_studyPopulationPopulation geneticsSampling (statistics)Human genetic variationBiologyCoalescent theory03 medical and health sciences030104 developmental biologyAncient DNAStatisticsGeneticsGene poolGeneral Agricultural and Biological ScienceseducationEcology Evolution Behavior and SystematicsEvolutionary Applications
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